Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Cts7-204ENSMUST00000225321 1257 ntBASIC11.86□□□□□ -0.51
Mmp25Q3U435 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Mmp25Q3U435 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp25Q3U435 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.86□□□□□ -0.51
Mmp25Q3U435 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.86□□□□□ -0.51
Mmp25Q3U435 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.85□□□□□ -0.51
Mmp25Q3U435 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm12314-201ENSMUST00000118104 538 ntBASIC11.85□□□□□ -0.51
Mmp25Q3U435 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.85□□□□□ -0.51
Mmp25Q3U435 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm26956-201ENSMUST00000182176 986 ntBASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm44364-201ENSMUST00000198368 141 ntBASIC11.85□□□□□ -0.51
Mmp25Q3U435 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.85□□□□□ -0.51
Mmp25Q3U435 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mmp25Q3U435 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.84□□□□□ -0.51
Mmp25Q3U435 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gm14723-201ENSMUST00000118686 215 ntBASIC11.84□□□□□ -0.51
Mmp25Q3U435 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gm43822-201ENSMUST00000200285 476 ntBASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gm6334-201ENSMUST00000207083 228 ntBASIC11.84□□□□□ -0.51
Mmp25Q3U435 Gm21769-201ENSMUST00000211922 111 ntBASIC11.84□□□□□ -0.51
Mmp25Q3U435 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mmp25Q3U435 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms