Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Gm37042-201ENSMUST00000193816 581 ntBASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc4Q3TCX3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Gm25668-201ENSMUST00000157700 129 ntBASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Morn2-202ENSMUST00000227729 656 ntBASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.01□□□□□ -0.49
Khdc4Q3TCX3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12□□□□□ -0.49
Khdc4Q3TCX3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12□□□□□ -0.49
Khdc4Q3TCX3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc4Q3TCX3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm10434-201ENSMUST00000101158 471 ntBASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm24548-201ENSMUST00000158650 108 ntBASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms