Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col19a1Q0VF58 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col19a1Q0VF58 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col19a1Q0VF58 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.33□□□□□ -0.27
Col19a1Q0VF58 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col19a1Q0VF58 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col19a1Q0VF58 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col19a1Q0VF58 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Mir671-201ENSMUST00000102432 98 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm7722-201ENSMUST00000120646 741 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm8737-201ENSMUST00000122208 642 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm15744-201ENSMUST00000161734 213 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm9022-201ENSMUST00000182482 992 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm4654-201ENSMUST00000183305 982 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm4604-201ENSMUST00000025040 390 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col19a1Q0VF58 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Gm25076-201ENSMUST00000104098 132 ntBASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Mir874-201ENSMUST00000104769 76 ntBASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Gm11663-201ENSMUST00000117888 290 ntBASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Gm45575-201ENSMUST00000210283 548 ntBASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms