Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.09□□□□□ -0.47
Hoxc4Q08624 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Hoxc4Q08624 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxc4Q08624 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxc4Q08624 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Hoxc4Q08624 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.08□□□□□ -0.48
Hoxc4Q08624 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.08□□□□□ -0.48
Hoxc4Q08624 Gm26461-201ENSMUST00000175064 290 ntBASIC12.08□□□□□ -0.48
Hoxc4Q08624 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Gm44262-201ENSMUST00000204969 372 ntBASIC12.08□□□□□ -0.48
Hoxc4Q08624 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Gm45433-201ENSMUST00000209386 247 ntBASIC12.08□□□□□ -0.48
Hoxc4Q08624 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.08□□□□□ -0.48
Hoxc4Q08624 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Gm9630-201ENSMUST00000178304 885 ntBASIC12.07□□□□□ -0.48
Hoxc4Q08624 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.07□□□□□ -0.48
Hoxc4Q08624 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.07□□□□□ -0.48
Hoxc4Q08624 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.07□□□□□ -0.48
Hoxc4Q08624 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc4Q08624 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Gm7857-201ENSMUST00000117957 358 ntBASIC12.06□□□□□ -0.48
Hoxc4Q08624 Gm14277-201ENSMUST00000121195 360 ntBASIC12.06□□□□□ -0.48
Hoxc4Q08624 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Gm27341-201ENSMUST00000183570 106 ntBASIC12.06□□□□□ -0.48
Hoxc4Q08624 Gm45224-201ENSMUST00000208203 414 ntBASIC12.06□□□□□ -0.48
Hoxc4Q08624 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms