Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Col17a1Q07563 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col17a1Q07563 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 Gm28386-201ENSMUST00000189147 1849 ntBASIC18.89■□□□□ 0.61
Col17a1Q07563 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Col17a1Q07563 Gm9022-201ENSMUST00000182482 992 ntBASIC18.89■□□□□ 0.61
Col17a1Q07563 Mir6359-201ENSMUST00000183668 81 ntBASIC18.89■□□□□ 0.61
Col17a1Q07563 Gm43726-201ENSMUST00000199110 775 ntBASIC18.89■□□□□ 0.61
Col17a1Q07563 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.89■□□□□ 0.61
Col17a1Q07563 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
Col17a1Q07563 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col17a1Q07563 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC18.88■□□□□ 0.61
Col17a1Q07563 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Col17a1Q07563 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Gm7701-201ENSMUST00000163185 1479 ntBASIC18.88■□□□□ 0.61
Col17a1Q07563 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Gm16030-201ENSMUST00000159098 603 ntBASIC18.88■□□□□ 0.61
Col17a1Q07563 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Col17a1Q07563 Gm43506-201ENSMUST00000200675 753 ntBASIC18.88■□□□□ 0.61
Col17a1Q07563 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC18.88■□□□□ 0.61
Col17a1Q07563 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Col17a1Q07563 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col17a1Q07563 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Col17a1Q07563 Gm21358-201ENSMUST00000191645 1659 ntBASIC18.87■□□□□ 0.61
Col17a1Q07563 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Defa-ps16-201ENSMUST00000121939 171 ntBASIC18.87■□□□□ 0.61
Col17a1Q07563 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC18.87■□□□□ 0.61
Col17a1Q07563 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Gm17541-201ENSMUST00000080062 525 ntBASIC18.87■□□□□ 0.61
Col17a1Q07563 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Col17a1Q07563 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col17a1Q07563 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm14005-210ENSMUST00000225087 1413 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm15136-201ENSMUST00000120552 533 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm13394-201ENSMUST00000121658 1000 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm9089-201ENSMUST00000122027 526 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm8197-202ENSMUST00000193422 934 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm38117-201ENSMUST00000194653 939 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm38151-201ENSMUST00000195085 289 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm43249-201ENSMUST00000200464 458 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.86■□□□□ 0.61
Col17a1Q07563 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col17a1Q07563 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col17a1Q07563 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms