Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Emx1Q04742 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Emx1Q04742 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Gm15371-201ENSMUST00000117057 784 ntBASIC11.75□□□□□ -0.53
Emx1Q04742 Gm12928-201ENSMUST00000117115 573 ntBASIC11.75□□□□□ -0.53
Emx1Q04742 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Gm27847-201ENSMUST00000183711 107 ntBASIC11.75□□□□□ -0.53
Emx1Q04742 Gm27375-201ENSMUST00000183799 107 ntBASIC11.75□□□□□ -0.53
Emx1Q04742 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.75□□□□□ -0.53
Emx1Q04742 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.75□□□□□ -0.53
Emx1Q04742 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.75□□□□□ -0.53
Emx1Q04742 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Emx1Q04742 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Emx1Q04742 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.75□□□□□ -0.53
Emx1Q04742 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.75□□□□□ -0.53
Emx1Q04742 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.75□□□□□ -0.53
Emx1Q04742 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Emx1Q04742 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.75□□□□□ -0.53
Emx1Q04742 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
Emx1Q04742 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Emx1Q04742 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.74□□□□□ -0.53
Emx1Q04742 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Emx1Q04742 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.74□□□□□ -0.53
Emx1Q04742 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.74□□□□□ -0.53
Emx1Q04742 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.74□□□□□ -0.53
Emx1Q04742 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Gm27390-201ENSMUST00000184516 176 ntBASIC11.74□□□□□ -0.53
Emx1Q04742 Mir6420-201ENSMUST00000185032 102 ntBASIC11.74□□□□□ -0.53
Emx1Q04742 Gm45784-201ENSMUST00000188360 142 ntBASIC11.74□□□□□ -0.53
Emx1Q04742 Gm2495-201ENSMUST00000191160 466 ntBASIC11.74□□□□□ -0.53
Emx1Q04742 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Emx1Q04742 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Emx1Q04742 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.74□□□□□ -0.53
Emx1Q04742 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Emx1Q04742 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.74□□□□□ -0.53
Emx1Q04742 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.74□□□□□ -0.53
Emx1Q04742 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Emx1Q04742 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Emx1Q04742 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.74□□□□□ -0.53
Emx1Q04742 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Emx1Q04742 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Emx1Q04742 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Emx1Q04742 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Emx1Q04742 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Emx1Q04742 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Emx1Q04742 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Emx1Q04742 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms