Protein–RNA interactions for Protein: Q04692

Smarcad1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, mousemouse

Predictions only

Length 1,021 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcad1Q04692 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Gm19163-201ENSMUST00000223313 780 ntBASIC13.5□□□□□ -0.25
Smarcad1Q04692 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.5□□□□□ -0.25
Smarcad1Q04692 Mir339-201ENSMUST00000083659 96 ntBASIC13.5□□□□□ -0.25
Smarcad1Q04692 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.5□□□□□ -0.25
Smarcad1Q04692 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcad1Q04692 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Gm27682-201ENSMUST00000183930 110 ntBASIC13.49□□□□□ -0.25
Smarcad1Q04692 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.49□□□□□ -0.25
Smarcad1Q04692 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcad1Q04692 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.48□□□□□ -0.25
Smarcad1Q04692 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.48□□□□□ -0.25
Smarcad1Q04692 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Gm26927-201ENSMUST00000182385 965 ntBASIC13.48□□□□□ -0.25
Smarcad1Q04692 Gm8099-201ENSMUST00000200510 742 ntBASIC13.48□□□□□ -0.25
Smarcad1Q04692 Gm6266-201ENSMUST00000203844 806 ntBASIC13.48□□□□□ -0.25
Smarcad1Q04692 Gm4768-201ENSMUST00000206199 686 ntBASIC13.48□□□□□ -0.25
Smarcad1Q04692 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.48□□□□□ -0.25
Smarcad1Q04692 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcad1Q04692 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcad1Q04692 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcad1Q04692 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcad1Q04692 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcad1Q04692 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcad1Q04692 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.47□□□□□ -0.25
Smarcad1Q04692 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms