Protein–RNA interactions for Protein: Q01065

Pde1b, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde1bQ01065 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde1bQ01065 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.18□□□□□ -0.3
Pde1bQ01065 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde1bQ01065 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde1bQ01065 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.18□□□□□ -0.3
Pde1bQ01065 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.17□□□□□ -0.3
Pde1bQ01065 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Gm8805-201ENSMUST00000117848 313 ntBASIC13.17□□□□□ -0.3
Pde1bQ01065 Gm8213-201ENSMUST00000118191 441 ntBASIC13.17□□□□□ -0.3
Pde1bQ01065 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Gm27847-201ENSMUST00000183711 107 ntBASIC13.17□□□□□ -0.3
Pde1bQ01065 Gm27375-201ENSMUST00000183799 107 ntBASIC13.17□□□□□ -0.3
Pde1bQ01065 Gm27839-201ENSMUST00000184242 106 ntBASIC13.17□□□□□ -0.3
Pde1bQ01065 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde1bQ01065 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde1bQ01065 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pde1bQ01065 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.16□□□□□ -0.3
Pde1bQ01065 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Cog3-203ENSMUST00000227473 4197 ntBASIC13.16□□□□□ -0.3
Pde1bQ01065 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.16□□□□□ -0.3
Pde1bQ01065 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.16□□□□□ -0.3
Pde1bQ01065 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.16□□□□□ -0.3
Pde1bQ01065 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pde1bQ01065 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde1bQ01065 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.15□□□□□ -0.3
Pde1bQ01065 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pde1bQ01065 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.15□□□□□ -0.3
Pde1bQ01065 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde1bQ01065 Gm29649-201ENSMUST00000185649 419 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms