Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.58□□□□□ -0.72
Npas1P97459 Gm19931-201ENSMUST00000198920 368 ntBASIC10.58□□□□□ -0.72
Npas1P97459 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Npas1P97459 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Gm7775-201ENSMUST00000218871 853 ntBASIC10.58□□□□□ -0.72
Npas1P97459 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.58□□□□□ -0.72
Npas1P97459 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.58□□□□□ -0.72
Npas1P97459 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Npas1P97459 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Npas1P97459 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Npas1P97459 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Npas1P97459 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.57□□□□□ -0.72
Npas1P97459 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.57□□□□□ -0.72
Npas1P97459 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Npas1P97459 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.57□□□□□ -0.72
Npas1P97459 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Npas1P97459 Gm15376-201ENSMUST00000122258 783 ntBASIC10.57□□□□□ -0.72
Npas1P97459 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.57□□□□□ -0.72
Npas1P97459 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.57□□□□□ -0.72
Npas1P97459 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Npas1P97459 Gm22175-201ENSMUST00000175007 78 ntBASIC10.57□□□□□ -0.72
Npas1P97459 Gm17837-201ENSMUST00000186435 985 ntBASIC10.57□□□□□ -0.72
Npas1P97459 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Gm44124-201ENSMUST00000204159 472 ntBASIC10.57□□□□□ -0.72
Npas1P97459 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.57□□□□□ -0.72
Npas1P97459 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.57□□□□□ -0.72
Npas1P97459 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Npas1P97459 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Npas1P97459 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.57□□□□□ -0.72
Npas1P97459 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Npas1P97459 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.57□□□□□ -0.72
Npas1P97459 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.57□□□□□ -0.72
Npas1P97459 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Npas1P97459 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Npas1P97459 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.56□□□□□ -0.72
Npas1P97459 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.56□□□□□ -0.72
Npas1P97459 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.56□□□□□ -0.72
Npas1P97459 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Npas1P97459 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.56□□□□□ -0.72
Npas1P97459 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms