Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim43bP86448 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim43bP86448 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.97□□□□□ -0.33
Trim43bP86448 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.97□□□□□ -0.33
Trim43bP86448 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Gm13226-201ENSMUST00000117838 404 ntBASIC12.97□□□□□ -0.33
Trim43bP86448 Gm12384-201ENSMUST00000119228 919 ntBASIC12.97□□□□□ -0.33
Trim43bP86448 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim43bP86448 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim43bP86448 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim43bP86448 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43bP86448 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trim43bP86448 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim43bP86448 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim43bP86448 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.96□□□□□ -0.33
Trim43bP86448 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Gm12742-201ENSMUST00000117326 410 ntBASIC12.96□□□□□ -0.33
Trim43bP86448 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim43bP86448 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim43bP86448 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim43bP86448 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Gm43818-201ENSMUST00000200605 466 ntBASIC12.96□□□□□ -0.33
Trim43bP86448 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.96□□□□□ -0.33
Trim43bP86448 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43bP86448 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.96□□□□□ -0.33
Trim43bP86448 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Trim43bP86448 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.96□□□□□ -0.34
Trim43bP86448 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.96□□□□□ -0.34
Trim43bP86448 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43bP86448 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.95□□□□□ -0.34
Trim43bP86448 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim43bP86448 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms