Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm29608-201ENSMUST00000190444 463 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
SgcaP82350 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.57□□□□□ -0.72
SgcaP82350 Gm5035-201ENSMUST00000215581 927 ntBASIC10.57□□□□□ -0.72
SgcaP82350 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.57□□□□□ -0.72
SgcaP82350 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.57□□□□□ -0.72
SgcaP82350 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.57□□□□□ -0.72
SgcaP82350 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SgcaP82350 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SgcaP82350 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SgcaP82350 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
SgcaP82350 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.57□□□□□ -0.72
SgcaP82350 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcaP82350 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
SgcaP82350 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.56□□□□□ -0.72
SgcaP82350 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
SgcaP82350 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Mir449b-201ENSMUST00000104833 80 ntBASIC10.56□□□□□ -0.72
SgcaP82350 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.56□□□□□ -0.72
SgcaP82350 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.56□□□□□ -0.72
SgcaP82350 Gm44344-201ENSMUST00000200287 129 ntBASIC10.56□□□□□ -0.72
SgcaP82350 Gm43703-201ENSMUST00000200523 763 ntBASIC10.56□□□□□ -0.72
SgcaP82350 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SgcaP82350 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
SgcaP82350 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.56□□□□□ -0.72
SgcaP82350 Chchd1-203ENSMUST00000224633 557 ntBASIC10.56□□□□□ -0.72
SgcaP82350 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
SgcaP82350 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.56□□□□□ -0.72
SgcaP82350 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.56□□□□□ -0.72
SgcaP82350 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
SgcaP82350 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.56□□□□□ -0.72
SgcaP82350 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.56□□□□□ -0.72
SgcaP82350 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.56□□□□□ -0.72
SgcaP82350 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
SgcaP82350 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SgcaP82350 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SgcaP82350 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
SgcaP82350 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.56□□□□□ -0.72
SgcaP82350 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.56□□□□□ -0.72
SgcaP82350 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcaP82350 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms