Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm29396-201ENSMUST00000185659 716 ntBASIC11.26□□□□□ -0.61
SgcbP82349 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SgcbP82349 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SgcbP82349 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SgcbP82349 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.26□□□□□ -0.61
SgcbP82349 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SgcbP82349 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SgcbP82349 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.25□□□□□ -0.61
SgcbP82349 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Gm15370-201ENSMUST00000117158 253 ntBASIC11.25□□□□□ -0.61
SgcbP82349 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC11.25□□□□□ -0.61
SgcbP82349 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.25□□□□□ -0.61
SgcbP82349 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.25□□□□□ -0.61
SgcbP82349 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SgcbP82349 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Gm27501-201ENSMUST00000183599 107 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
SgcbP82349 Gm43118-201ENSMUST00000199149 775 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.25□□□□□ -0.61
SgcbP82349 Olfr284-202ENSMUST00000206647 966 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.25□□□□□ -0.61
SgcbP82349 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Gm45331-201ENSMUST00000209868 554 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Gm9368-201ENSMUST00000219348 831 ntBASIC11.25□□□□□ -0.61
SgcbP82349 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SgcbP82349 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SgcbP82349 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.25□□□□□ -0.61
SgcbP82349 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.25□□□□□ -0.61
SgcbP82349 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
SgcbP82349 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.25□□□□□ -0.61
SgcbP82349 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcbP82349 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SgcbP82349 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.24□□□□□ -0.61
SgcbP82349 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SgcbP82349 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SgcbP82349 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
SgcbP82349 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.24□□□□□ -0.61
SgcbP82349 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.24□□□□□ -0.61
SgcbP82349 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SgcbP82349 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
SgcbP82349 Gm27516-201ENSMUST00000184237 98 ntBASIC11.24□□□□□ -0.61
SgcbP82349 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Gm38092-201ENSMUST00000195600 653 ntBASIC11.24□□□□□ -0.61
SgcbP82349 Gm44405-201ENSMUST00000198952 126 ntBASIC11.24□□□□□ -0.61
SgcbP82349 Gm6007-201ENSMUST00000208170 823 ntBASIC11.24□□□□□ -0.61
SgcbP82349 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.24□□□□□ -0.61
SgcbP82349 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.24□□□□□ -0.61
SgcbP82349 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.24□□□□□ -0.61
SgcbP82349 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.24□□□□□ -0.61
SgcbP82349 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms