Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lhx1P63006 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lhx1P63006 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lhx1P63006 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.36□□□□□ -0.43
Lhx1P63006 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lhx1P63006 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lhx1P63006 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Lhx1P63006 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.36□□□□□ -0.43
Lhx1P63006 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Gm27046-201ENSMUST00000182160 463 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.36□□□□□ -0.43
Lhx1P63006 Gm13097-201ENSMUST00000210722 397 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Gm39404-201ENSMUST00000216350 313 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lhx1P63006 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Lhx1P63006 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lhx1P63006 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.36□□□□□ -0.43
Lhx1P63006 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.36□□□□□ -0.43
Lhx1P63006 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lhx1P63006 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lhx1P63006 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Lhx1P63006 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Lhx1P63006 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.35□□□□□ -0.43
Lhx1P63006 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.35□□□□□ -0.43
Lhx1P63006 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Mir877-201ENSMUST00000104738 85 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lhx1P63006 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Lhx1P63006 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.35□□□□□ -0.43
Lhx1P63006 Gm17376-201ENSMUST00000166016 84 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.35□□□□□ -0.43
Lhx1P63006 Gm28882-201ENSMUST00000185504 314 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Gm6082-201ENSMUST00000215204 454 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Gm26035-201ENSMUST00000083065 308 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lhx1P63006 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.35□□□□□ -0.43
Lhx1P63006 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lhx1P63006 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms