Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Lsm5P62322 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Gm26035-201ENSMUST00000083065 308 ntBASIC10.46□□□□□ -0.73
Lsm5P62322 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Lsm5P62322 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Lsm5P62322 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Lsm5P62322 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.74
Lsm5P62322 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Lsm5P62322 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.46□□□□□ -0.74
Lsm5P62322 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm5P62322 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Lsm5P62322 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Lsm5P62322 Gm11779-201ENSMUST00000118541 368 ntBASIC10.45□□□□□ -0.74
Lsm5P62322 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm5P62322 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm5P62322 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm5P62322 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.45□□□□□ -0.74
Lsm5P62322 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Lsm5P62322 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm5P62322 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm5P62322 Gm43703-201ENSMUST00000200523 763 ntBASIC10.45□□□□□ -0.74
Lsm5P62322 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.45□□□□□ -0.74
Lsm5P62322 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.45□□□□□ -0.74
Lsm5P62322 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.45□□□□□ -0.74
Lsm5P62322 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Lsm5P62322 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.45□□□□□ -0.74
Lsm5P62322 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Lsm5P62322 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm5P62322 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms