Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm6P62313 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.06□□□□□ -0.64
Lsm6P62313 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.06□□□□□ -0.64
Lsm6P62313 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Gm18584-201ENSMUST00000203098 964 ntBASIC11.06□□□□□ -0.64
Lsm6P62313 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.06□□□□□ -0.64
Lsm6P62313 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.06□□□□□ -0.64
Lsm6P62313 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.06□□□□□ -0.64
Lsm6P62313 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.06□□□□□ -0.64
Lsm6P62313 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.06□□□□□ -0.64
Lsm6P62313 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lsm6P62313 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.06□□□□□ -0.64
Lsm6P62313 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm6P62313 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Lsm6P62313 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lsm6P62313 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
Lsm6P62313 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.05□□□□□ -0.64
Lsm6P62313 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.05□□□□□ -0.64
Lsm6P62313 Gm19184-201ENSMUST00000196798 928 ntBASIC11.05□□□□□ -0.64
Lsm6P62313 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.05□□□□□ -0.64
Lsm6P62313 Gm6266-201ENSMUST00000203844 806 ntBASIC11.05□□□□□ -0.64
Lsm6P62313 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Lsm6P62313 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lsm6P62313 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.05□□□□□ -0.64
Lsm6P62313 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.05□□□□□ -0.64
Lsm6P62313 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm6P62313 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lsm6P62313 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms