Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lsm3P62311 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.43□□□□□ -0.58
Lsm3P62311 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Shd-206ENSMUST00000225145 998 ntBASIC11.43□□□□□ -0.58
Lsm3P62311 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.43□□□□□ -0.58
Lsm3P62311 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.43□□□□□ -0.58
Lsm3P62311 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lsm3P62311 Gm15240-201ENSMUST00000118156 720 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Lsm3P62311 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.42□□□□□ -0.58
Lsm3P62311 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.42□□□□□ -0.58
Lsm3P62311 Gm18889-201ENSMUST00000174284 929 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 Gm18905-201ENSMUST00000205454 928 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 Gm46209-201ENSMUST00000217912 553 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lsm3P62311 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.42□□□□□ -0.58
Lsm3P62311 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lsm3P62311 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lsm3P62311 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm3P62311 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.41□□□□□ -0.58
Lsm3P62311 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Lsm3P62311 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms