Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.18□□□□□ -0.62
Sf3b6P59708 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.18□□□□□ -0.62
Sf3b6P59708 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.18□□□□□ -0.62
Sf3b6P59708 Gm8515-201ENSMUST00000194852 576 ntBASIC11.18□□□□□ -0.62
Sf3b6P59708 Gm18018-201ENSMUST00000198273 408 ntBASIC11.18□□□□□ -0.62
Sf3b6P59708 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sf3b6P59708 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.18□□□□□ -0.62
Sf3b6P59708 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.17□□□□□ -0.62
Sf3b6P59708 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.17□□□□□ -0.62
Sf3b6P59708 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.17□□□□□ -0.62
Sf3b6P59708 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b6P59708 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sf3b6P59708 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.17□□□□□ -0.62
Sf3b6P59708 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sf3b6P59708 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm16202-201ENSMUST00000117532 544 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm5687-201ENSMUST00000118252 640 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms