Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nup43P59235 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nup43P59235 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nup43P59235 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Nup43P59235 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Nup43P59235 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.89□□□□□ -0.51
Nup43P59235 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.89□□□□□ -0.51
Nup43P59235 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Nup43P59235 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.89□□□□□ -0.51
Nup43P59235 Gm13316-201ENSMUST00000140537 691 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Rmrp-201ENSMUST00000157463 271 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.89□□□□□ -0.51
Nup43P59235 Gm44882-201ENSMUST00000205702 802 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.89□□□□□ -0.51
Nup43P59235 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Gm9899-201ENSMUST00000065519 555 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Gm26035-201ENSMUST00000083065 308 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.89□□□□□ -0.51
Nup43P59235 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nup43P59235 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nup43P59235 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.89□□□□□ -0.51
Nup43P59235 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup43P59235 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.88□□□□□ -0.51
Nup43P59235 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nup43P59235 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nup43P59235 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.88□□□□□ -0.51
Nup43P59235 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.88□□□□□ -0.51
Nup43P59235 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.88□□□□□ -0.51
Nup43P59235 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.88□□□□□ -0.51
Nup43P59235 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Nup43P59235 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.88□□□□□ -0.51
Nup43P59235 Gm10608-202ENSMUST00000213924 676 ntBASIC11.88□□□□□ -0.51
Nup43P59235 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.88□□□□□ -0.51
Nup43P59235 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.88□□□□□ -0.51
Nup43P59235 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.88□□□□□ -0.51
Nup43P59235 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.88□□□□□ -0.51
Nup43P59235 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gm7399-201ENSMUST00000032395 858 ntBASIC11.88□□□□□ -0.51
Nup43P59235 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.88□□□□□ -0.51
Nup43P59235 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.88□□□□□ -0.51
Nup43P59235 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nup43P59235 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms