Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
SmoP56726 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SmoP56726 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SmoP56726 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SmoP56726 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.63□□□□□ -0.39
SmoP56726 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.63□□□□□ -0.39
SmoP56726 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SmoP56726 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SmoP56726 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SmoP56726 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.63□□□□□ -0.39
SmoP56726 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SmoP56726 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.63□□□□□ -0.39
SmoP56726 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.63□□□□□ -0.39
SmoP56726 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SmoP56726 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SmoP56726 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SmoP56726 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SmoP56726 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SmoP56726 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SmoP56726 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SmoP56726 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.62□□□□□ -0.39
SmoP56726 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.62□□□□□ -0.39
SmoP56726 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
SmoP56726 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.62□□□□□ -0.39
SmoP56726 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SmoP56726 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.62□□□□□ -0.39
SmoP56726 Mir877-201ENSMUST00000104738 85 ntBASIC12.62□□□□□ -0.39
SmoP56726 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Gm14109-201ENSMUST00000118814 309 ntBASIC12.62□□□□□ -0.39
SmoP56726 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
SmoP56726 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.62□□□□□ -0.39
SmoP56726 Gm27046-201ENSMUST00000182160 463 ntBASIC12.62□□□□□ -0.39
SmoP56726 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Gm38317-201ENSMUST00000195564 343 ntBASIC12.62□□□□□ -0.39
SmoP56726 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SmoP56726 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.62□□□□□ -0.39
SmoP56726 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SmoP56726 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SmoP56726 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SmoP56726 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SmoP56726 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
SmoP56726 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms