Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Gm22323-201ENSMUST00000103832 109 ntBASIC14.67□□□□□ -0.06
Usp5P56399 Gm25214-201ENSMUST00000104573 129 ntBASIC14.67□□□□□ -0.06
Usp5P56399 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Usp5P56399 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.67□□□□□ -0.06
Usp5P56399 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Usp5P56399 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.67□□□□□ -0.06
Usp5P56399 Gm37201-201ENSMUST00000191845 523 ntBASIC14.67□□□□□ -0.06
Usp5P56399 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.67□□□□□ -0.06
Usp5P56399 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Usp5P56399 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Usp5P56399 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Usp5P56399 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Usp5P56399 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Usp5P56399 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Usp5P56399 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.66□□□□□ -0.06
Usp5P56399 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Usp5P56399 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Usp5P56399 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Gm14726-201ENSMUST00000120623 896 ntBASIC14.66□□□□□ -0.06
Usp5P56399 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Usp5P56399 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp5P56399 Gm31256-201ENSMUST00000194705 506 ntBASIC14.66□□□□□ -0.06
Usp5P56399 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp5P56399 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Usp5P56399 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Usp5P56399 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.66□□□□□ -0.06
Usp5P56399 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Usp5P56399 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.66□□□□□ -0.06
Usp5P56399 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Usp5P56399 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Usp5P56399 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Usp5P56399 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Usp5P56399 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Usp5P56399 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Usp5P56399 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Usp5P56399 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.65□□□□□ -0.06
Usp5P56399 Gm26083-201ENSMUST00000157904 193 ntBASIC14.65□□□□□ -0.06
Usp5P56399 Gm25043-201ENSMUST00000158604 212 ntBASIC14.65□□□□□ -0.06
Usp5P56399 Gm17376-201ENSMUST00000166016 84 ntBASIC14.65□□□□□ -0.06
Usp5P56399 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Usp5P56399 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.65□□□□□ -0.06
Usp5P56399 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.65□□□□□ -0.06
Usp5P56399 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.65□□□□□ -0.06
Usp5P56399 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.65□□□□□ -0.06
Usp5P56399 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.65□□□□□ -0.06
Usp5P56399 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Usp5P56399 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms