Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.5□□□□□ -0.57
Cdh11P55288 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh11P55288 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Cdh11P55288 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdh11P55288 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.49□□□□□ -0.57
Cdh11P55288 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Cdh11P55288 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Cdh11P55288 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Gm29127-201ENSMUST00000188304 517 ntBASIC11.49□□□□□ -0.57
Cdh11P55288 Gm44124-201ENSMUST00000204159 472 ntBASIC11.49□□□□□ -0.57
Cdh11P55288 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Gm8598-201ENSMUST00000221184 836 ntBASIC11.49□□□□□ -0.57
Cdh11P55288 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdh11P55288 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdh11P55288 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh11P55288 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdh11P55288 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdh11P55288 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Cdh11P55288 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdh11P55288 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cdh11P55288 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm22331-201ENSMUST00000158066 136 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 Gm8810-201ENSMUST00000172895 754 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdh11P55288 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 Gm40466-201ENSMUST00000212174 422 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm10012-201ENSMUST00000078252 192 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdh11P55288 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh11P55288 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.48□□□□□ -0.57
Cdh11P55288 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdh11P55288 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms