Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.03□□□□□ -0.48
Cdkn2bP55271 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.03□□□□□ -0.48
Cdkn2bP55271 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.03□□□□□ -0.48
Cdkn2bP55271 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.03□□□□□ -0.48
Cdkn2bP55271 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Paupar-201ENSMUST00000194826 3482 ntBASIC12.03□□□□□ -0.48
Cdkn2bP55271 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdkn2bP55271 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.02□□□□□ -0.48
Cdkn2bP55271 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdkn2bP55271 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Gm12203-201ENSMUST00000118235 598 ntBASIC12.02□□□□□ -0.49
Cdkn2bP55271 Gm13369-201ENSMUST00000119442 987 ntBASIC12.02□□□□□ -0.49
Cdkn2bP55271 Gm12209-201ENSMUST00000120089 596 ntBASIC12.02□□□□□ -0.49
Cdkn2bP55271 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdkn2bP55271 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdkn2bP55271 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.01□□□□□ -0.49
Cdkn2bP55271 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.01□□□□□ -0.49
Cdkn2bP55271 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdkn2bP55271 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms