Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx6P54823 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx6P54823 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx6P54823 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx6P54823 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx6P54823 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx6P54823 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx6P54823 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.79□□□□□ -0.36
Ddx6P54823 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.79□□□□□ -0.36
Ddx6P54823 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx6P54823 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx6P54823 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ddx6P54823 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.78□□□□□ -0.36
Ddx6P54823 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ddx6P54823 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Gm9083-201ENSMUST00000120423 819 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 B9d1os-201ENSMUST00000137010 674 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Gm23119-201ENSMUST00000158610 140 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.78□□□□□ -0.36
Ddx6P54823 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx6P54823 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Gm19994-201ENSMUST00000217086 586 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx6P54823 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx6P54823 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx6P54823 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Ddx6P54823 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.78□□□□□ -0.36
Ddx6P54823 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx6P54823 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx6P54823 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Ddx6P54823 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ddx6P54823 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.77□□□□□ -0.36
Ddx6P54823 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx6P54823 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ddx6P54823 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Ddx6P54823 Gm23200-201ENSMUST00000104379 132 ntBASIC12.77□□□□□ -0.37
Ddx6P54823 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.77□□□□□ -0.37
Ddx6P54823 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Ddx6P54823 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.77□□□□□ -0.37
Ddx6P54823 Gm37666-201ENSMUST00000194110 866 ntBASIC12.77□□□□□ -0.37
Ddx6P54823 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ddx6P54823 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.77□□□□□ -0.37
Ddx6P54823 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ddx6P54823 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.77□□□□□ -0.37
Ddx6P54823 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.77□□□□□ -0.37
Ddx6P54823 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ddx6P54823 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ddx6P54823 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx6P54823 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.76□□□□□ -0.37
Ddx6P54823 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms