Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.59□□□□□ -0.39
Fdft1P53798 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.59□□□□□ -0.39
Fdft1P53798 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Mir339-201ENSMUST00000083659 96 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Fdft1P53798 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Fdft1P53798 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.59□□□□□ -0.39
Fdft1P53798 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.59□□□□□ -0.39
Fdft1P53798 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fdft1P53798 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Fdft1P53798 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Fdft1P53798 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Fdft1P53798 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.58□□□□□ -0.4
Fdft1P53798 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Fdft1P53798 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.58□□□□□ -0.4
Fdft1P53798 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.58□□□□□ -0.4
Fdft1P53798 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Fdft1P53798 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.58□□□□□ -0.4
Fdft1P53798 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Fdft1P53798 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.58□□□□□ -0.4
Fdft1P53798 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.58□□□□□ -0.4
Fdft1P53798 Gm4271-201ENSMUST00000174444 973 ntBASIC12.58□□□□□ -0.4
Fdft1P53798 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Gm37042-201ENSMUST00000193816 581 ntBASIC12.58□□□□□ -0.4
Fdft1P53798 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.58□□□□□ -0.4
Fdft1P53798 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.58□□□□□ -0.4
Fdft1P53798 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.58□□□□□ -0.4
Fdft1P53798 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.58□□□□□ -0.4
Fdft1P53798 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.58□□□□□ -0.4
Fdft1P53798 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Fdft1P53798 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Fdft1P53798 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fdft1P53798 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.58□□□□□ -0.4
Fdft1P53798 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.57□□□□□ -0.4
Fdft1P53798 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Fdft1P53798 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Fdft1P53798 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.57□□□□□ -0.4
Fdft1P53798 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.57□□□□□ -0.4
Fdft1P53798 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Fdft1P53798 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.57□□□□□ -0.4
Fdft1P53798 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms