Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Gm8018-201ENSMUST00000173536 789 ntBASIC12.44□□□□□ -0.42
Pdx1P52946 Gm42693-201ENSMUST00000196779 631 ntBASIC12.44□□□□□ -0.42
Pdx1P52946 Gm44405-201ENSMUST00000198952 126 ntBASIC12.44□□□□□ -0.42
Pdx1P52946 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.44□□□□□ -0.42
Pdx1P52946 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.44□□□□□ -0.42
Pdx1P52946 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pdx1P52946 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pdx1P52946 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pdx1P52946 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Gm24231-201ENSMUST00000104315 133 ntBASIC12.43□□□□□ -0.42
Pdx1P52946 Gm13736-201ENSMUST00000119272 253 ntBASIC12.43□□□□□ -0.42
Pdx1P52946 Gm13315-201ENSMUST00000120376 991 ntBASIC12.43□□□□□ -0.42
Pdx1P52946 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.43□□□□□ -0.42
Pdx1P52946 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
Pdx1P52946 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pdx1P52946 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.43□□□□□ -0.42
Pdx1P52946 Gm43630-201ENSMUST00000201550 776 ntBASIC12.43□□□□□ -0.42
Pdx1P52946 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.43□□□□□ -0.42
Pdx1P52946 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.43□□□□□ -0.42
Pdx1P52946 Gm45925-201ENSMUST00000218882 744 ntBASIC12.43□□□□□ -0.42
Pdx1P52946 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.43□□□□□ -0.42
Pdx1P52946 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.43□□□□□ -0.42
Pdx1P52946 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pdx1P52946 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pdx1P52946 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Pdx1P52946 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Pdx1P52946 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pdx1P52946 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdx1P52946 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Pdx1P52946 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pdx1P52946 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pdx1P52946 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdx1P52946 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pdx1P52946 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Pdx1P52946 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Mir1247-201ENSMUST00000116706 82 ntBASIC12.42□□□□□ -0.42
Pdx1P52946 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Gm13875-201ENSMUST00000120162 282 ntBASIC12.42□□□□□ -0.42
Pdx1P52946 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.42□□□□□ -0.42
Pdx1P52946 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Rmrp-201ENSMUST00000157463 271 ntBASIC12.42□□□□□ -0.42
Pdx1P52946 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.42□□□□□ -0.42
Pdx1P52946 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.42□□□□□ -0.42
Pdx1P52946 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdx1P52946 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.42□□□□□ -0.42
Pdx1P52946 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdx1P52946 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pdx1P52946 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms