Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.38□□□□□ -0.59
Rfx3P48381 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.38□□□□□ -0.59
Rfx3P48381 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.38□□□□□ -0.59
Rfx3P48381 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.38□□□□□ -0.59
Rfx3P48381 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.38□□□□□ -0.59
Rfx3P48381 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.38□□□□□ -0.59
Rfx3P48381 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.38□□□□□ -0.59
Rfx3P48381 Mir1894-201ENSMUST00000122802 81 ntBASIC11.38□□□□□ -0.59
Rfx3P48381 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.38□□□□□ -0.59
Rfx3P48381 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Gm9002-201ENSMUST00000178437 499 ntBASIC11.38□□□□□ -0.59
Rfx3P48381 Gm6244-201ENSMUST00000178732 841 ntBASIC11.38□□□□□ -0.59
Rfx3P48381 Gm27892-201ENSMUST00000185017 106 ntBASIC11.38□□□□□ -0.59
Rfx3P48381 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.38□□□□□ -0.59
Rfx3P48381 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.38□□□□□ -0.59
Rfx3P48381 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.38□□□□□ -0.59
Rfx3P48381 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rfx3P48381 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rfx3P48381 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Rfx3P48381 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Rfx3P48381 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.37□□□□□ -0.59
Rfx3P48381 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Gm8805-201ENSMUST00000117848 313 ntBASIC11.37□□□□□ -0.59
Rfx3P48381 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.37□□□□□ -0.59
Rfx3P48381 Gm10156-201ENSMUST00000122364 462 ntBASIC11.37□□□□□ -0.59
Rfx3P48381 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.37□□□□□ -0.59
Rfx3P48381 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.37□□□□□ -0.59
Rfx3P48381 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rfx3P48381 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Rfx3P48381 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rfx3P48381 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rfx3P48381 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.37□□□□□ -0.59
Rfx3P48381 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.37□□□□□ -0.59
Rfx3P48381 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Rfx3P48381 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rfx3P48381 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.36□□□□□ -0.59
Rfx3P48381 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.36□□□□□ -0.59
Rfx3P48381 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.36□□□□□ -0.59
Rfx3P48381 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rfx3P48381 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms