Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rfx2P48379 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rfx2P48379 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfx2P48379 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfx2P48379 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfx2P48379 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rfx2P48379 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.21□□□□□ -0.3
Rfx2P48379 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.21□□□□□ -0.3
Rfx2P48379 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rfx2P48379 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rfx2P48379 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rfx2P48379 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rfx2P48379 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfx2P48379 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfx2P48379 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.2□□□□□ -0.3
Rfx2P48379 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rfx2P48379 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Snord83b-201ENSMUST00000104546 94 ntBASIC13.2□□□□□ -0.3
Rfx2P48379 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.2□□□□□ -0.3
Rfx2P48379 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Gm15808-201ENSMUST00000119046 604 ntBASIC13.2□□□□□ -0.3
Rfx2P48379 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.2□□□□□ -0.3
Rfx2P48379 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rfx2P48379 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfx2P48379 Gm23363-201ENSMUST00000175024 79 ntBASIC13.2□□□□□ -0.3
Rfx2P48379 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.2□□□□□ -0.3
Rfx2P48379 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.2□□□□□ -0.3
Rfx2P48379 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.2□□□□□ -0.3
Rfx2P48379 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.2□□□□□ -0.3
Rfx2P48379 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.2□□□□□ -0.3
Rfx2P48379 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.2□□□□□ -0.3
Rfx2P48379 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfx2P48379 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.19□□□□□ -0.3
Rfx2P48379 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Gm14726-201ENSMUST00000120623 896 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Gm13316-201ENSMUST00000140537 691 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.19□□□□□ -0.3
Rfx2P48379 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.19□□□□□ -0.3
Rfx2P48379 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Gm18056-201ENSMUST00000207670 568 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Gm18061-201ENSMUST00000208350 562 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Gm18063-201ENSMUST00000208529 568 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Gm18052-201ENSMUST00000208750 559 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rfx2P48379 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Rfx2P48379 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.19□□□□□ -0.3
Rfx2P48379 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rfx2P48379 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfx2P48379 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfx2P48379 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rfx2P48379 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.18□□□□□ -0.3
Rfx2P48379 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfx2P48379 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.18□□□□□ -0.3
Rfx2P48379 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfx2P48379 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfx2P48379 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms