Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps4bP46467 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vps4bP46467 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps4bP46467 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.78□□□□□ -0.36
Vps4bP46467 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Vps4bP46467 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Gm13369-201ENSMUST00000119442 987 ntBASIC12.78□□□□□ -0.36
Vps4bP46467 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Vps4bP46467 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps4bP46467 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps4bP46467 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps4bP46467 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Gm24196-201ENSMUST00000179161 110 ntBASIC12.78□□□□□ -0.36
Vps4bP46467 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.78□□□□□ -0.36
Vps4bP46467 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Vps4bP46467 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps4bP46467 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps4bP46467 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Vps4bP46467 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps4bP46467 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps4bP46467 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps4bP46467 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps4bP46467 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.78□□□□□ -0.36
Vps4bP46467 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4bP46467 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4bP46467 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4bP46467 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4bP46467 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Vps4bP46467 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4bP46467 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vps4bP46467 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps4bP46467 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vps4bP46467 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps4bP46467 Gm11814-201ENSMUST00000119515 929 ntBASIC12.77□□□□□ -0.37
Vps4bP46467 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.77□□□□□ -0.37
Vps4bP46467 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps4bP46467 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.77□□□□□ -0.37
Vps4bP46467 Gm27839-201ENSMUST00000184242 106 ntBASIC12.77□□□□□ -0.37
Vps4bP46467 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps4bP46467 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps4bP46467 Gm4768-201ENSMUST00000206199 686 ntBASIC12.77□□□□□ -0.37
Vps4bP46467 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps4bP46467 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.77□□□□□ -0.37
Vps4bP46467 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Vps4bP46467 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps4bP46467 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.77□□□□□ -0.37
Vps4bP46467 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps4bP46467 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4bP46467 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps4bP46467 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps4bP46467 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.76□□□□□ -0.37
Vps4bP46467 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Gm10146-201ENSMUST00000072739 309 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms