Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.14□□□□□ -0.47
Tnfsf4P43488 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gm11803-201ENSMUST00000119966 444 ntBASIC12.14□□□□□ -0.47
Tnfsf4P43488 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.14□□□□□ -0.47
Tnfsf4P43488 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gm8810-201ENSMUST00000172895 754 ntBASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gm27390-201ENSMUST00000184516 176 ntBASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gm37497-201ENSMUST00000195830 798 ntBASIC12.14□□□□□ -0.47
Tnfsf4P43488 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Snord83b-201ENSMUST00000104546 94 ntBASIC12.13□□□□□ -0.47
Tnfsf4P43488 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Gm13369-201ENSMUST00000119442 987 ntBASIC12.13□□□□□ -0.47
Tnfsf4P43488 Gm15703-201ENSMUST00000120250 880 ntBASIC12.13□□□□□ -0.47
Tnfsf4P43488 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Auts2-212ENSMUST00000178555 309 ntBASIC12.13□□□□□ -0.47
Tnfsf4P43488 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.13□□□□□ -0.47
Tnfsf4P43488 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.13□□□□□ -0.47
Tnfsf4P43488 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf4P43488 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm12203-201ENSMUST00000118235 598 ntBASIC12.12□□□□□ -0.47
Tnfsf4P43488 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm12209-201ENSMUST00000120089 596 ntBASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm16296-201ENSMUST00000159905 325 ntBASIC12.12□□□□□ -0.47
Tnfsf4P43488 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms