Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TfamP40630 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TfamP40630 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TfamP40630 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TfamP40630 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TfamP40630 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TfamP40630 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.2□□□□□ -0.46
TfamP40630 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.2□□□□□ -0.46
TfamP40630 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TfamP40630 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.19□□□□□ -0.46
TfamP40630 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.19□□□□□ -0.46
TfamP40630 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
TfamP40630 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.19□□□□□ -0.46
TfamP40630 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Gm24196-201ENSMUST00000179161 110 ntBASIC12.19□□□□□ -0.46
TfamP40630 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.19□□□□□ -0.46
TfamP40630 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.19□□□□□ -0.46
TfamP40630 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.19□□□□□ -0.46
TfamP40630 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.19□□□□□ -0.46
TfamP40630 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.19□□□□□ -0.46
TfamP40630 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.19□□□□□ -0.46
TfamP40630 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.19□□□□□ -0.46
TfamP40630 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TfamP40630 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TfamP40630 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TfamP40630 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.18□□□□□ -0.46
TfamP40630 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TfamP40630 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.18□□□□□ -0.46
TfamP40630 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Gm9002-201ENSMUST00000178437 499 ntBASIC12.18□□□□□ -0.46
TfamP40630 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.18□□□□□ -0.46
TfamP40630 Gm44124-201ENSMUST00000204159 472 ntBASIC12.18□□□□□ -0.46
TfamP40630 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.18□□□□□ -0.46
TfamP40630 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TfamP40630 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.18□□□□□ -0.46
TfamP40630 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.18□□□□□ -0.46
TfamP40630 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TfamP40630 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
TfamP40630 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
TfamP40630 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.17□□□□□ -0.46
TfamP40630 Paupar-201ENSMUST00000194826 3482 ntBASIC12.17□□□□□ -0.46
TfamP40630 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TfamP40630 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.17□□□□□ -0.46
TfamP40630 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TfamP40630 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TfamP40630 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms