Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.68□□□□□ -0.38
Fen1P39749 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.68□□□□□ -0.38
Fen1P39749 Gm24694-201ENSMUST00000180054 110 ntBASIC12.68□□□□□ -0.38
Fen1P39749 Gm27663-201ENSMUST00000184839 110 ntBASIC12.68□□□□□ -0.38
Fen1P39749 Gm38223-201ENSMUST00000194484 695 ntBASIC12.68□□□□□ -0.38
Fen1P39749 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.68□□□□□ -0.38
Fen1P39749 Gm6458-201ENSMUST00000211573 635 ntBASIC12.68□□□□□ -0.38
Fen1P39749 Gm6218-201ENSMUST00000219812 628 ntBASIC12.68□□□□□ -0.38
Fen1P39749 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.68□□□□□ -0.38
Fen1P39749 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.68□□□□□ -0.38
Fen1P39749 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.68□□□□□ -0.38
Fen1P39749 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.68□□□□□ -0.38
Fen1P39749 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Fen1P39749 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fen1P39749 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.67□□□□□ -0.38
Fen1P39749 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Fen1P39749 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.67□□□□□ -0.38
Fen1P39749 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Fen1P39749 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Fen1P39749 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Fen1P39749 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Fen1P39749 Gm12859-201ENSMUST00000117834 427 ntBASIC12.67□□□□□ -0.38
Fen1P39749 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.67□□□□□ -0.38
Fen1P39749 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.67□□□□□ -0.38
Fen1P39749 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Fen1P39749 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Fen1P39749 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Fen1P39749 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Fen1P39749 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Fen1P39749 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Fen1P39749 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fen1P39749 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Fen1P39749 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Fen1P39749 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fen1P39749 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Fen1P39749 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Fen1P39749 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Gm13689-201ENSMUST00000119360 685 ntBASIC12.66□□□□□ -0.38
Fen1P39749 Gm15321-201ENSMUST00000121290 288 ntBASIC12.66□□□□□ -0.38
Fen1P39749 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.66□□□□□ -0.38
Fen1P39749 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.66□□□□□ -0.38
Fen1P39749 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.66□□□□□ -0.38
Fen1P39749 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.66□□□□□ -0.38
Fen1P39749 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.66□□□□□ -0.38
Fen1P39749 Gm9794-201ENSMUST00000202370 423 ntBASIC12.66□□□□□ -0.38
Fen1P39749 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms