Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.54□□□□□ -0.4
LdlrP35951 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LdlrP35951 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.54□□□□□ -0.4
LdlrP35951 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LdlrP35951 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.54□□□□□ -0.4
LdlrP35951 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.54□□□□□ -0.4
LdlrP35951 Gm44397-201ENSMUST00000195950 113 ntBASIC12.54□□□□□ -0.4
LdlrP35951 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Gm40466-201ENSMUST00000212174 422 ntBASIC12.54□□□□□ -0.4
LdlrP35951 Gm6013-201ENSMUST00000212264 699 ntBASIC12.54□□□□□ -0.4
LdlrP35951 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.54□□□□□ -0.4
LdlrP35951 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.54□□□□□ -0.4
LdlrP35951 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LdlrP35951 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.54□□□□□ -0.4
LdlrP35951 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LdlrP35951 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LdlrP35951 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LdlrP35951 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LdlrP35951 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LdlrP35951 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LdlrP35951 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LdlrP35951 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LdlrP35951 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
LdlrP35951 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.53□□□□□ -0.4
LdlrP35951 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.53□□□□□ -0.4
LdlrP35951 Gm38671-201ENSMUST00000200573 130 ntBASIC12.53□□□□□ -0.4
LdlrP35951 Gm43818-201ENSMUST00000200605 466 ntBASIC12.53□□□□□ -0.4
LdlrP35951 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.53□□□□□ -0.4
LdlrP35951 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.53□□□□□ -0.4
LdlrP35951 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LdlrP35951 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
LdlrP35951 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LdlrP35951 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.53□□□□□ -0.4
LdlrP35951 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.53□□□□□ -0.4
LdlrP35951 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.53□□□□□ -0.4
LdlrP35951 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LdlrP35951 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
LdlrP35951 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LdlrP35951 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.52□□□□□ -0.4
LdlrP35951 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LdlrP35951 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.52□□□□□ -0.41
LdlrP35951 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.52□□□□□ -0.41
LdlrP35951 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.52□□□□□ -0.41
LdlrP35951 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.52□□□□□ -0.41
LdlrP35951 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.52□□□□□ -0.41
LdlrP35951 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.52□□□□□ -0.41
LdlrP35951 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.52□□□□□ -0.41
LdlrP35951 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.52□□□□□ -0.41
LdlrP35951 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.52□□□□□ -0.41
LdlrP35951 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.52□□□□□ -0.41
LdlrP35951 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.52□□□□□ -0.41
LdlrP35951 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.52□□□□□ -0.41
LdlrP35951 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms