Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.96□□□□□ -0.33
Nfkb1P25799 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.96□□□□□ -0.33
Nfkb1P25799 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.96□□□□□ -0.33
Nfkb1P25799 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nfkb1P25799 Gm8712-201ENSMUST00000221090 701 ntBASIC12.96□□□□□ -0.33
Nfkb1P25799 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.96□□□□□ -0.33
Nfkb1P25799 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Nfkb1P25799 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.96□□□□□ -0.33
Nfkb1P25799 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nfkb1P25799 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nfkb1P25799 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nfkb1P25799 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nfkb1P25799 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nfkb1P25799 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nfkb1P25799 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nfkb1P25799 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nfkb1P25799 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nfkb1P25799 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nfkb1P25799 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Nfkb1P25799 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nfkb1P25799 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nfkb1P25799 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.96□□□□□ -0.34
Nfkb1P25799 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nfkb1P25799 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.95□□□□□ -0.34
Nfkb1P25799 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.95□□□□□ -0.34
Nfkb1P25799 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Gm3096-201ENSMUST00000185770 364 ntBASIC12.95□□□□□ -0.34
Nfkb1P25799 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.95□□□□□ -0.34
Nfkb1P25799 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.95□□□□□ -0.34
Nfkb1P25799 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.95□□□□□ -0.34
Nfkb1P25799 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.95□□□□□ -0.34
Nfkb1P25799 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nfkb1P25799 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Gm14109-201ENSMUST00000118814 309 ntBASIC12.94□□□□□ -0.34
Nfkb1P25799 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Gm27023-201ENSMUST00000182372 285 ntBASIC12.94□□□□□ -0.34
Nfkb1P25799 Gm8885-201ENSMUST00000189382 598 ntBASIC12.94□□□□□ -0.34
Nfkb1P25799 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.94□□□□□ -0.34
Nfkb1P25799 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nfkb1P25799 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nfkb1P25799 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms