Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.5□□□□□ -0.73
Tnfrsf9P20334 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tnfrsf9P20334 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Tnfrsf9P20334 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Tnfrsf9P20334 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tnfrsf9P20334 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.5□□□□□ -0.73
Tnfrsf9P20334 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.5□□□□□ -0.73
Tnfrsf9P20334 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.49□□□□□ -0.73
Tnfrsf9P20334 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Gm24380-201ENSMUST00000122696 324 ntBASIC10.49□□□□□ -0.73
Tnfrsf9P20334 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Gm5161-201ENSMUST00000075243 853 ntBASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Tnfrsf9P20334 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gm4454-201ENSMUST00000190585 2578 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gm14381-201ENSMUST00000122105 414 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gm25261-201ENSMUST00000157416 134 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Gm44146-201ENSMUST00000203508 816 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf9P20334 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms