Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lire1P11260 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Lire1P11260 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lire1P11260 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.02□□□□□ -0.49
Lire1P11260 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Lire1P11260 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.02□□□□□ -0.49
Lire1P11260 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lire1P11260 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lire1P11260 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lire1P11260 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Lire1P11260 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lire1P11260 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.01□□□□□ -0.49
Lire1P11260 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.01□□□□□ -0.49
Lire1P11260 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Gm12485-201ENSMUST00000119641 291 ntBASIC12.01□□□□□ -0.49
Lire1P11260 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.01□□□□□ -0.49
Lire1P11260 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.01□□□□□ -0.49
Lire1P11260 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.01□□□□□ -0.49
Lire1P11260 Gm43818-201ENSMUST00000200605 466 ntBASIC12.01□□□□□ -0.49
Lire1P11260 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.01□□□□□ -0.49
Lire1P11260 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.01□□□□□ -0.49
Lire1P11260 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lire1P11260 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lire1P11260 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12□□□□□ -0.49
Lire1P11260 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lire1P11260 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Gm15198-201ENSMUST00000117283 177 ntBASIC12□□□□□ -0.49
Lire1P11260 Gm15376-201ENSMUST00000122258 783 ntBASIC12□□□□□ -0.49
Lire1P11260 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12□□□□□ -0.49
Lire1P11260 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12□□□□□ -0.49
Lire1P11260 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Lire1P11260 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Gm24644-201ENSMUST00000157114 139 ntBASIC12□□□□□ -0.49
Lire1P11260 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12□□□□□ -0.49
Lire1P11260 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12□□□□□ -0.49
Lire1P11260 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 Gm18473-201ENSMUST00000220543 868 ntBASIC12□□□□□ -0.49
Lire1P11260 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 AC140451.2-201ENSMUST00000228030 664 ntBASIC12□□□□□ -0.49
Lire1P11260 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lire1P11260 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms