Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ccl1P10146 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.74□□□□□ -0.85
Ccl1P10146 Gm13813-201ENSMUST00000120998 787 ntBASIC9.74□□□□□ -0.85
Ccl1P10146 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Ccl1P10146 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Gm3436-201ENSMUST00000179930 840 ntBASIC9.74□□□□□ -0.85
Ccl1P10146 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ccl1P10146 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.74□□□□□ -0.85
Ccl1P10146 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Ccl1P10146 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Ccl1P10146 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ccl1P10146 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ccl1P10146 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Ccl1P10146 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ccl1P10146 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl1P10146 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ccl1P10146 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Ccl1P10146 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.73□□□□□ -0.85
Ccl1P10146 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Ccl1P10146 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.73□□□□□ -0.85
Ccl1P10146 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.73□□□□□ -0.85
Ccl1P10146 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.73□□□□□ -0.85
Ccl1P10146 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Ccl1P10146 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.73□□□□□ -0.85
Ccl1P10146 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Ccl1P10146 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.73□□□□□ -0.85
Ccl1P10146 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccl1P10146 Gm26035-201ENSMUST00000083065 308 ntBASIC9.73□□□□□ -0.85
Ccl1P10146 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccl1P10146 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccl1P10146 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.73□□□□□ -0.85
Ccl1P10146 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Ccl1P10146 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.73□□□□□ -0.85
Ccl1P10146 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccl1P10146 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccl1P10146 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms