Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.09□□□□□ -0.47
Hcn1O88704 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hcn1O88704 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.09□□□□□ -0.47
Hcn1O88704 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.09□□□□□ -0.47
Hcn1O88704 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hcn1O88704 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hcn1O88704 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Hcn1O88704 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hcn1O88704 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hcn1O88704 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hcn1O88704 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Hcn1O88704 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hcn1O88704 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hcn1O88704 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.08□□□□□ -0.48
Hcn1O88704 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.08□□□□□ -0.48
Hcn1O88704 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
Hcn1O88704 Gm1335-201ENSMUST00000121653 386 ntBASIC12.08□□□□□ -0.48
Hcn1O88704 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.08□□□□□ -0.48
Hcn1O88704 Gm27682-201ENSMUST00000183930 110 ntBASIC12.08□□□□□ -0.48
Hcn1O88704 Gm28693-202ENSMUST00000190758 331 ntBASIC12.08□□□□□ -0.48
Hcn1O88704 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.08□□□□□ -0.48
Hcn1O88704 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hcn1O88704 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.08□□□□□ -0.48
Hcn1O88704 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.08□□□□□ -0.48
Hcn1O88704 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hcn1O88704 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.08□□□□□ -0.48
Hcn1O88704 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.08□□□□□ -0.48
Hcn1O88704 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.08□□□□□ -0.48
Hcn1O88704 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hcn1O88704 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.07□□□□□ -0.48
Hcn1O88704 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Gm8805-201ENSMUST00000117848 313 ntBASIC12.07□□□□□ -0.48
Hcn1O88704 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.07□□□□□ -0.48
Hcn1O88704 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
Hcn1O88704 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.07□□□□□ -0.48
Hcn1O88704 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.07□□□□□ -0.48
Hcn1O88704 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.07□□□□□ -0.48
Hcn1O88704 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.07□□□□□ -0.48
Hcn1O88704 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hcn1O88704 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hcn1O88704 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hcn1O88704 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Hcn1O88704 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Hcn1O88704 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hcn1O88704 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hcn1O88704 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.06□□□□□ -0.48
Hcn1O88704 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Gm2231-201ENSMUST00000125661 612 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms