Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.37□□□□□ -0.43
ClppO88696 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.37□□□□□ -0.43
ClppO88696 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
ClppO88696 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.36□□□□□ -0.43
ClppO88696 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.36□□□□□ -0.43
ClppO88696 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.36□□□□□ -0.43
ClppO88696 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.36□□□□□ -0.43
ClppO88696 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ClppO88696 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Gm7809-201ENSMUST00000153199 742 ntBASIC12.36□□□□□ -0.43
ClppO88696 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ClppO88696 Gm38341-201ENSMUST00000195357 515 ntBASIC12.36□□□□□ -0.43
ClppO88696 Gm43758-201ENSMUST00000199500 367 ntBASIC12.36□□□□□ -0.43
ClppO88696 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.36□□□□□ -0.43
ClppO88696 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
ClppO88696 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ClppO88696 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
ClppO88696 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ClppO88696 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
ClppO88696 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClppO88696 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ClppO88696 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.35□□□□□ -0.43
ClppO88696 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ClppO88696 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Gm10434-201ENSMUST00000101158 471 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm11222-201ENSMUST00000119005 738 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.35□□□□□ -0.43
ClppO88696 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.35□□□□□ -0.43
ClppO88696 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.35□□□□□ -0.43
ClppO88696 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ClppO88696 Gm6222-202ENSMUST00000182143 629 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm3890-201ENSMUST00000182416 207 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm37489-201ENSMUST00000191883 159 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.35□□□□□ -0.43
ClppO88696 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.35□□□□□ -0.43
ClppO88696 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm6458-201ENSMUST00000211573 635 ntBASIC12.35□□□□□ -0.43
ClppO88696 Gm21769-201ENSMUST00000211922 111 ntBASIC12.35□□□□□ -0.43
ClppO88696 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.35□□□□□ -0.43
ClppO88696 Gm8227-201ENSMUST00000223306 571 ntBASIC12.35□□□□□ -0.43
ClppO88696 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Cts7-204ENSMUST00000225321 1257 ntBASIC12.35□□□□□ -0.43
ClppO88696 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms