Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ldb2O55203 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.5□□□□□ -0.41
Ldb2O55203 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ldb2O55203 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm13316-201ENSMUST00000140537 691 ntBASIC12.5□□□□□ -0.41
Ldb2O55203 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm9022-201ENSMUST00000182482 992 ntBASIC12.5□□□□□ -0.41
Ldb2O55203 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm38158-201ENSMUST00000194617 339 ntBASIC12.5□□□□□ -0.41
Ldb2O55203 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.5□□□□□ -0.41
Ldb2O55203 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm45925-201ENSMUST00000218882 744 ntBASIC12.5□□□□□ -0.41
Ldb2O55203 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.5□□□□□ -0.41
Ldb2O55203 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.5□□□□□ -0.41
Ldb2O55203 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ldb2O55203 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.49□□□□□ -0.41
Ldb2O55203 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.49□□□□□ -0.41
Ldb2O55203 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.49□□□□□ -0.41
Ldb2O55203 Gm38002-201ENSMUST00000193255 180 ntBASIC12.49□□□□□ -0.41
Ldb2O55203 Gm43133-201ENSMUST00000197472 463 ntBASIC12.49□□□□□ -0.41
Ldb2O55203 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.49□□□□□ -0.41
Ldb2O55203 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.49□□□□□ -0.41
Ldb2O55203 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Gm10478-201ENSMUST00000084451 396 ntBASIC12.49□□□□□ -0.41
Ldb2O55203 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.49□□□□□ -0.41
Ldb2O55203 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.49□□□□□ -0.41
Ldb2O55203 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.49□□□□□ -0.41
Ldb2O55203 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ldb2O55203 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ldb2O55203 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb2O55203 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb2O55203 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms