Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.95□□□□□ -0.02
Smarce1O54941 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.95□□□□□ -0.02
Smarce1O54941 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarce1O54941 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Smarce1O54941 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.95□□□□□ -0.02
Smarce1O54941 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarce1O54941 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.94□□□□□ -0.02
Smarce1O54941 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Smarce1O54941 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.94□□□□□ -0.02
Smarce1O54941 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smarce1O54941 Gm12203-201ENSMUST00000118235 598 ntBASIC14.94□□□□□ -0.02
Smarce1O54941 Gm12209-201ENSMUST00000120089 596 ntBASIC14.94□□□□□ -0.02
Smarce1O54941 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.94□□□□□ -0.02
Smarce1O54941 Gm16296-201ENSMUST00000159905 325 ntBASIC14.94□□□□□ -0.02
Smarce1O54941 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Gm7063-201ENSMUST00000186840 981 ntBASIC14.94□□□□□ -0.02
Smarce1O54941 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.94□□□□□ -0.02
Smarce1O54941 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Smarce1O54941 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Smarce1O54941 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.94□□□□□ -0.02
Smarce1O54941 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smarce1O54941 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.94□□□□□ -0.02
Smarce1O54941 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.94□□□□□ -0.02
Smarce1O54941 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarce1O54941 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.93□□□□□ -0.02
Smarce1O54941 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.93□□□□□ -0.02
Smarce1O54941 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Smarce1O54941 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.93□□□□□ -0.02
Smarce1O54941 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.93□□□□□ -0.02
Smarce1O54941 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.93□□□□□ -0.02
Smarce1O54941 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.93□□□□□ -0.02
Smarce1O54941 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.93□□□□□ -0.02
Smarce1O54941 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.93□□□□□ -0.02
Smarce1O54941 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.93□□□□□ -0.02
Smarce1O54941 Gm4768-201ENSMUST00000206199 686 ntBASIC14.93□□□□□ -0.02
Smarce1O54941 Gm8227-201ENSMUST00000223306 571 ntBASIC14.93□□□□□ -0.02
Smarce1O54941 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.93□□□□□ -0.02
Smarce1O54941 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Smarce1O54941 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarce1O54941 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.92□□□□□ -0.02
Smarce1O54941 Snord83b-201ENSMUST00000104546 94 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms