Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Itgb3O54890 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Itgb3O54890 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Itgb3O54890 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Itgb3O54890 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Itgb3O54890 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Itgb3O54890 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Gm12314-201ENSMUST00000118104 538 ntBASIC13.33□□□□□ -0.28
Itgb3O54890 Gm15547-201ENSMUST00000122152 333 ntBASIC13.33□□□□□ -0.28
Itgb3O54890 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.33□□□□□ -0.28
Itgb3O54890 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Itgb3O54890 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Itgb3O54890 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Itgb3O54890 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.33□□□□□ -0.28
Itgb3O54890 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Itgb3O54890 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Itgb3O54890 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Itgb3O54890 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Itgb3O54890 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Gm24231-201ENSMUST00000104315 133 ntBASIC13.32□□□□□ -0.28
Itgb3O54890 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.32□□□□□ -0.28
Itgb3O54890 Gm25668-201ENSMUST00000157700 129 ntBASIC13.32□□□□□ -0.28
Itgb3O54890 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.32□□□□□ -0.28
Itgb3O54890 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.32□□□□□ -0.28
Itgb3O54890 Gm8712-201ENSMUST00000221090 701 ntBASIC13.32□□□□□ -0.28
Itgb3O54890 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.32□□□□□ -0.28
Itgb3O54890 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Itgb3O54890 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.32□□□□□ -0.28
Itgb3O54890 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Itgb3O54890 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Itgb3O54890 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Itgb3O54890 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Gm11930-201ENSMUST00000117788 190 ntBASIC13.31□□□□□ -0.28
Itgb3O54890 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.31□□□□□ -0.28
Itgb3O54890 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Gm4857-201ENSMUST00000192718 785 ntBASIC13.31□□□□□ -0.28
Itgb3O54890 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.31□□□□□ -0.28
Itgb3O54890 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms