Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Limk2O54785 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Limk2O54785 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Limk2O54785 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Limk2O54785 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Limk2O54785 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.78□□□□□ -0.36
Limk2O54785 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Limk2O54785 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.78□□□□□ -0.36
Limk2O54785 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.78□□□□□ -0.36
Limk2O54785 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Mir3547-201ENSMUST00000175461 88 ntBASIC12.78□□□□□ -0.36
Limk2O54785 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.78□□□□□ -0.36
Limk2O54785 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.78□□□□□ -0.36
Limk2O54785 Gm5904-201ENSMUST00000210286 865 ntBASIC12.78□□□□□ -0.36
Limk2O54785 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.78□□□□□ -0.36
Limk2O54785 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.78□□□□□ -0.36
Limk2O54785 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.78□□□□□ -0.36
Limk2O54785 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Limk2O54785 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.78□□□□□ -0.36
Limk2O54785 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Limk2O54785 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Limk2O54785 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Limk2O54785 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Limk2O54785 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Limk2O54785 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Gm14760-201ENSMUST00000121831 999 ntBASIC12.77□□□□□ -0.37
Limk2O54785 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.77□□□□□ -0.37
Limk2O54785 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.77□□□□□ -0.37
Limk2O54785 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.77□□□□□ -0.37
Limk2O54785 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.77□□□□□ -0.37
Limk2O54785 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.77□□□□□ -0.37
Limk2O54785 Gm8018-201ENSMUST00000173536 789 ntBASIC12.77□□□□□ -0.37
Limk2O54785 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.77□□□□□ -0.37
Limk2O54785 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Limk2O54785 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.77□□□□□ -0.37
Limk2O54785 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.77□□□□□ -0.37
Limk2O54785 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.77□□□□□ -0.37
Limk2O54785 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Gm22058-201ENSMUST00000083393 310 ntBASIC12.77□□□□□ -0.37
Limk2O54785 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Limk2O54785 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.77□□□□□ -0.37
Limk2O54785 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.77□□□□□ -0.37
Limk2O54785 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Limk2O54785 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Limk2O54785 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Limk2O54785 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms