Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.38□□□□□ -0.43
Slc1a6O35544 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.38□□□□□ -0.43
Slc1a6O35544 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Slc1a6O35544 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc1a6O35544 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.38□□□□□ -0.43
Slc1a6O35544 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Slc1a6O35544 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.37□□□□□ -0.43
Slc1a6O35544 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.37□□□□□ -0.43
Slc1a6O35544 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.37□□□□□ -0.43
Slc1a6O35544 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.37□□□□□ -0.43
Slc1a6O35544 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.37□□□□□ -0.43
Slc1a6O35544 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Slc1a6O35544 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.37□□□□□ -0.43
Slc1a6O35544 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.37□□□□□ -0.43
Slc1a6O35544 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.37□□□□□ -0.43
Slc1a6O35544 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.37□□□□□ -0.43
Slc1a6O35544 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Slc1a6O35544 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc1a6O35544 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.36□□□□□ -0.43
Slc1a6O35544 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Slc1a6O35544 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.36□□□□□ -0.43
Slc1a6O35544 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.36□□□□□ -0.43
Slc1a6O35544 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.36□□□□□ -0.43
Slc1a6O35544 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc1a6O35544 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.36□□□□□ -0.43
Slc1a6O35544 Gm6218-201ENSMUST00000219812 628 ntBASIC12.36□□□□□ -0.43
Slc1a6O35544 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc1a6O35544 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms