Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC19■□□□□ 0.63
Polr1aO35134 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Gm5706-201ENSMUST00000181525 993 ntBASIC19■□□□□ 0.63
Polr1aO35134 AC099645.1-201ENSMUST00000226476 1105 ntBASIC19■□□□□ 0.63
Polr1aO35134 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Polr1aO35134 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Polr1aO35134 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC18.99■□□□□ 0.63
Polr1aO35134 Gm11836-201ENSMUST00000121022 441 ntBASIC18.99■□□□□ 0.63
Polr1aO35134 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC18.99■□□□□ 0.63
Polr1aO35134 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC18.99■□□□□ 0.63
Polr1aO35134 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC18.99■□□□□ 0.63
Polr1aO35134 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC18.99■□□□□ 0.63
Polr1aO35134 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Polr1aO35134 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Polr1aO35134 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC18.98■□□□□ 0.63
Polr1aO35134 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Gm14585-201ENSMUST00000120713 634 ntBASIC18.98■□□□□ 0.63
Polr1aO35134 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Polr1aO35134 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC18.98■□□□□ 0.63
Polr1aO35134 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Polr1aO35134 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC18.98■□□□□ 0.63
Polr1aO35134 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Polr1aO35134 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC18.98■□□□□ 0.63
Polr1aO35134 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm11956-201ENSMUST00000119525 512 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC18.97■□□□□ 0.63
Polr1aO35134 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC18.97■□□□□ 0.63
Polr1aO35134 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC18.97■□□□□ 0.63
Polr1aO35134 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm5879-201ENSMUST00000089501 1209 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Polr1aO35134 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm30238-201ENSMUST00000195528 2603 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 AC129931.1-201ENSMUST00000228865 1861 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Gm25076-201ENSMUST00000104098 132 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Gm14193-201ENSMUST00000105067 153 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm12856-201ENSMUST00000119471 1293 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Gm13328-201ENSMUST00000120816 1020 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC18.97■□□□□ 0.63
Polr1aO35134 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Polr1aO35134 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC18.97■□□□□ 0.63
Polr1aO35134 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC18.97■□□□□ 0.63
Polr1aO35134 AC166344.1-201ENSMUST00000223745 674 ntBASIC18.97■□□□□ 0.63
Polr1aO35134 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Polr1aO35134 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Polr1aO35134 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC18.96■□□□□ 0.63
Polr1aO35134 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Polr1aO35134 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Polr1aO35134 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC18.96■□□□□ 0.63
Polr1aO35134 Gm9630-201ENSMUST00000178304 885 ntBASIC18.96■□□□□ 0.63
Polr1aO35134 Gm37299-201ENSMUST00000193951 826 ntBASIC18.96■□□□□ 0.63
Polr1aO35134 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms