Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Ebf3O08791 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ebf3O08791 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Ebf3O08791 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.1□□□□□ -0.31
Ebf3O08791 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.1□□□□□ -0.31
Ebf3O08791 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Ebf3O08791 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.1□□□□□ -0.31
Ebf3O08791 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.1□□□□□ -0.31
Ebf3O08791 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.1□□□□□ -0.31
Ebf3O08791 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf3O08791 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.1□□□□□ -0.31
Ebf3O08791 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.1□□□□□ -0.31
Ebf3O08791 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf3O08791 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ebf3O08791 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.09□□□□□ -0.31
Ebf3O08791 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ebf3O08791 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ebf3O08791 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.09□□□□□ -0.31
Ebf3O08791 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ebf3O08791 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ebf3O08791 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.09□□□□□ -0.31
Ebf3O08791 Gm11930-201ENSMUST00000117788 190 ntBASIC13.09□□□□□ -0.31
Ebf3O08791 Gm13492-201ENSMUST00000119772 665 ntBASIC13.09□□□□□ -0.31
Ebf3O08791 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Ebf3O08791 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.09□□□□□ -0.31
Ebf3O08791 AA914427-201ENSMUST00000193194 1166 ntBASIC13.09□□□□□ -0.31
Ebf3O08791 Gm38092-201ENSMUST00000195600 653 ntBASIC13.09□□□□□ -0.31
Ebf3O08791 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.09□□□□□ -0.31
Ebf3O08791 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Ebf3O08791 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms