Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm12291-201ENSMUST00000121627 311 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm14719-201ENSMUST00000121891 340 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm24694-201ENSMUST00000180054 110 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm5354-201ENSMUST00000182417 973 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm27663-201ENSMUST00000184839 110 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Mir339-201ENSMUST00000083659 96 ntBASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Shisa8J3QNX5 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shisa8J3QNX5 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Itm2b-204ENSMUST00000228637 783 ntBASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms