Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Gm13296-201ENSMUST00000117854 997 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Gm11597-201ENSMUST00000121423 964 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Gm24845-201ENSMUST00000158034 109 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Gm27341-201ENSMUST00000183570 106 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Rprl1-202ENSMUST00000198476 238 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Gm39404-201ENSMUST00000216350 313 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.79□□□□□ -0.36
Ccdc149F6V035 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc149F6V035 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm14028-201ENSMUST00000117434 479 ntBASIC12.78□□□□□ -0.36
Ccdc149F6V035 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm44262-201ENSMUST00000204969 372 ntBASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.78□□□□□ -0.36
Ccdc149F6V035 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gzmn-202ENSMUST00000225535 989 ntBASIC12.78□□□□□ -0.36
Ccdc149F6V035 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.78□□□□□ -0.36
Ccdc149F6V035 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms