Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gm9022-201ENSMUST00000182482 992 ntBASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gm42627-201ENSMUST00000197347 224 ntBASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cpsf4lE9Q2N0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm13786-201ENSMUST00000122371 333 ntBASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Mospd4-201ENSMUST00000180618 576 ntBASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm42693-201ENSMUST00000196779 631 ntBASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cpsf4lE9Q2N0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cpsf4lE9Q2N0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms