Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.28□□□□□ -0.44
Clip3B9EHT4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm11637-201ENSMUST00000120601 592 ntBASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm11978-201ENSMUST00000122315 466 ntBASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.28□□□□□ -0.44
Clip3B9EHT4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm19931-201ENSMUST00000198920 368 ntBASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.28□□□□□ -0.44
Clip3B9EHT4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.28□□□□□ -0.44
Clip3B9EHT4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip3B9EHT4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clip3B9EHT4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip3B9EHT4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Mir1247-201ENSMUST00000116706 82 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Gm16379-201ENSMUST00000161469 348 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Mir7221-201ENSMUST00000184009 72 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Gm27516-201ENSMUST00000184237 98 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Gm8762-201ENSMUST00000193486 339 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Gm10608-202ENSMUST00000213924 676 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Gm19309-201ENSMUST00000218295 205 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.27□□□□□ -0.45
Clip3B9EHT4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip3B9EHT4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clip3B9EHT4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clip3B9EHT4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms