Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.33□□□□□ -0.44
Chd3B1AR17 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chd3B1AR17 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm24231-201ENSMUST00000104315 133 ntBASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chd3B1AR17 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.33□□□□□ -0.44
Chd3B1AR17 Rps4l-202ENSMUST00000204242 789 ntBASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm18041-201ENSMUST00000218210 618 ntBASIC12.33□□□□□ -0.44
Chd3B1AR17 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Chd3B1AR17 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Chd3B1AR17 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chd3B1AR17 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.32□□□□□ -0.44
Chd3B1AR17 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.32□□□□□ -0.44
Chd3B1AR17 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.32□□□□□ -0.44
Chd3B1AR17 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Mir433-201ENSMUST00000093564 124 ntBASIC12.32□□□□□ -0.44
Chd3B1AR17 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chd3B1AR17 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd3B1AR17 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chd3B1AR17 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm12015-201ENSMUST00000117065 843 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm12217-201ENSMUST00000118858 696 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Mir5132-201ENSMUST00000175166 71 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm44958-201ENSMUST00000203734 736 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chd3B1AR17 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm24990-201ENSMUST00000157406 323 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm8712-201ENSMUST00000221090 701 ntBASIC12.31□□□□□ -0.44
Chd3B1AR17 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd3B1AR17 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd3B1AR17 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms